title=Hierachical Exploration of Gene Expression Microarrays Online

[B1]
name= Kim 2010 bladder cancer Cancer Specific
expr= /Users/rohan/public_html/Hegemon/kim-2010-bladder-expr.txt
index= /Users/rohan/public_html/Hegemon/kim-2010-bladder-idx.txt
survival= /Users/rohan/public_html/Hegemon/kim-2010-bladder-os.txt
indexHeader= /Users/rohan/public_html/Hegemon/kim-2010-bladder-ih.txt

[B2]
name= Phillips 2018 Retina (log-reduced)
expr= /Users/rohan/public_html/Hegemon/Data2/Data/GSE98556/phillips-2018-retina-expr.txt
index= /Users/rohan/public_html/Hegemon/Data2/Data/GSE98556/phillips-2018-retina-idx.txt
survival= /Users/rohan/public_html/Hegemon/Data2/Data/GSE98556/phillips-2018-retina-survival.txt
indexheader= /Users/rohan/public_html/Hegemon/Data2/Data/GSE98556/phillips-2018-retina-ih.txt
info= /Users/rohan/public_html/Hegemon/Data2/Data/GSE98556/phillips-2018-retina-info.txt
key= rt:
source= GSE98556

[B3]
name= Phillips 2018 Retina (raw data)
expr= /Users/rohan/public_html/Hegemon/Data2/rawData/phillips-2018-retina-expr.txt
index= /Users/rohan/public_html/Hegemon/Data2/rawData/phillips-2018-retina-idx.txt
survival= /Users/rohan/public_html/Hegemon/Data2/rawData/phillips-2018-retina-survival.txt
indexheader= /Users/rohan/public_html/Hegemon/Data2/rawData/phillips-2018-retina-ih.txt
info= /Users/rohan/public_html/Hegemon/Data2/rawData/phillips-2018-retina-info.txt
key= rt:
source= GSE98556

[B4]
name= Phillips 2018 Retina MRN
expr= /Users/rohan/public_html/Hegemon/Data2/mrnData2/phillips-2018-retina-expr.txt
index= /Users/rohan/public_html/Hegemon/Data2/mrnData2/phillips-2018-retina-idx.txt
survival= /Users/rohan/public_html/Hegemon/Data2/mrnData2/phillips-2018-retina-survival.txt
indexheader= /Users/rohan/public_html/Hegemon/Data2/mrnData2/phillips-2018-retina-ih.txt
info= /Users/rohan/public_html/Hegemon/Data2/mrnData2/phillips-2018-retina-info.txt
key= rt:
source= GSE98556

[RT27]
name= Shigeoka 2016 Mm RGC
expr= /booleanfs2/sahoo/Data/RB/Mouse/GSE79352/shigeoka-2016-rgc-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/GSE79352/shigeoka-2016-rgc-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/GSE79352/shigeoka-2016-rgc-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/GSE79352/shigeoka-2016-rgc-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/GSE79352/shigeoka-2016-rgc-info.txt
key= rt:
source= GSE79352

[RT28]
name= Sajgo 2017 Mm RGC
expr= /booleanfs2/sahoo/Data/RB/Mouse/GSE87647/sajgo-2017-rgc-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/GSE87647/sajgo-2017-rgc-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/GSE87647/sajgo-2017-rgc-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/GSE87647/sajgo-2017-rgc-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/GSE87647/sajgo-2017-rgc-info.txt
key= rt:
source= GSE87647

[RT29]
name= Phillips 2018 hPSCs retina (all)
expr= /booleanfs2/sahoo/Data/RB/Human/GSE98556/phillips-2018-retina-expr.txt
index= /booleanfs2/sahoo/Data/RB/Human/GSE98556/phillips-2018-retina-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Human/GSE98556/phillips-2018-retina-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Human/GSE98556/phillips-2018-retina-ih.txt
info= /booleanfs2/sahoo/Data/RB/Human/GSE98556/phillips-2018-retina-info.txt
key= rt:
source= GSE98556

[RT20]
name= Rheaume 2018 RGC scRNASeq
expr= /booleanfs2/sahoo/Data/RB/Mouse/GSE115404/rheaume-2018-rgc-2-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/GSE115404/rheaume-2018-rgc-2-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/GSE115404/rheaume-2018-rgc-2-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/GSE115404/rheaume-2018-rgc-2-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/GSE115404/rheaume-2018-rgc-2-info.txt
key= rt:
source= GSE115404

[RT5]
name=  Kuroda 2017 RPE Hs
expr= /booleanfs2/sahoo/Data/RB/Human/kuroda-2017-rpe-expr.txt
index= /booleanfs2/sahoo/Data/RB/Human/kuroda-2017-rpe-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Human/kuroda-2017-rpe-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Human/kuroda-2017-rpe-ih.txt
info= /booleanfs2/sahoo/Data/RB/Human/kuroda-2017-rpe-info.txt
key= rt:
source= GSE80985

[RT1]
name= Cherry Trimarchi 2009 Mm
expr= /booleanfs2/sahoo/Data/RB/Mouse/cherry-trimarchi-2009-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/cherry-trimarchi-2009-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/cherry-trimarchi-2009-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/cherry-trimarchi-2009-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/cherry-trimarchi-2009-info.txt
key= rt:
source= GSE12601 GSE9811 GSE9812 GSE13635 GSE15566 GSE35386 GSE35682 GSE37207

[RT14]
name=   Mustafi 2016 RNASeq Mm
expr= /booleanfs2/sahoo/Data/RB/Mouse/Mustafi/mustafi-2016-retina-mm-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/Mustafi/mustafi-2016-retina-mm-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/Mustafi/mustafi-2016-retina-mm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/Mustafi/mustafi-2016-retina-mm-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/Mustafi/mustafi-2016-retina-mm-info.txt
key= rt:
source= GSE29752 GSE38359 GSE48974 GSE55376 GSE55377 GSE61239 GSE84927

[RT18]
name=   Mustafi-Pinelli-Stambolian
expr= /booleanfs2/sahoo/Data/RB/Human/Mustafi/mps-retina-expr.txt
index= /booleanfs2/sahoo/Data/RB/Human/Mustafi/mps-retina-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Human/Mustafi/mps-retina-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Human/Mustafi/mps-retina-ih.txt
info= /booleanfs2/sahoo/Data/RB/Human/Mustafi/mps-retina-info.txt
key= rt:
source= GSE84930 E-MTAB-4377 GSE94437

[B5]
name=  Voigt 2019 Retina Hs
expr= /Users/rohan/public_html/Hegemon/Data2/voigt-2019-retina-3/voigt-2019-retina-expr.txt
index= /Users/rohan/public_html/Hegemon/Data2/voigt-2019-retina-3/voigt-2019-retina-idx.txt
survival= /Users/rohan/public_html/Hegemon/Data2/voigt-2019-retina-3/voigt-2019-retina-survival.txt
indexHeader= /Users/rohan/public_html/Hegemon/Data2/voigt-2019-retina-3/voigt-2019-retina-ih.txt
info= /Users/rohan/public_html/Hegemon/Data2/voigt-2019-retina-3/voigt-2019-retina-info.txt
key= rt:
source= GSE130636

[B6]
name=  Voigt 2020 Retina Hs AIR
expr= /Users/rohan/public_html/Hegemon/Data2/voigt-2020-retina/voigt-2020-retina-expr.txt
index= /Users/rohan/public_html/Hegemon/Data2/voigt-2020-retina/voigt-2020-retina-idx.txt
survival= /Users/rohan/public_html/Hegemon/Data2/voigt-2020-retina/voigt-2020-retina-survival.txt
indexHeader= /Users/rohan/public_html/Hegemon/Data2/voigt-2020-retina/voigt-2020-retina-ih.txt
info= /Users/rohan/public_html/Hegemon/Data2/voigt-2020-retina/voigt-2020-retina-info.txt
key= rt:
source= GSE130636 GSE142449

[RT40]
name = Hartl 2017 retina mm
expr= /booleanfs2/sahoo/Data/RB/Mouse/GSE84589/Hartl-2017-retina-mm-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/GSE84589/Hartl-2017-retina-mm-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/GSE84589/Hartl-2017-retina-mm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/GSE84589/Hartl-2017-retina-mm-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/GSE84589/Hartl-2017-retina-mm-info.txt
key= rt:
source= GSE84589

[RT41]
name = Sarin 2018 retina mm
expr= /booleanfs2/sahoo/Data/RB/Mouse/GSE98838/Sarin-2018-retina-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/GSE98838/Sarin-2018-retina-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/GSE98838/Sarin-2018-retina-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/GSE98838/Sarin-2018-retina-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/GSE98838/Sarin-2018-retina-info.txt
key= rt:
source= GSE98838

[RT47]
name = kim 2016 rods mm
expr= /booleanfs2/sahoo/Data/RB/Mouse/kim-2016-rods-mm-expr.txt
index= /booleanfs2/sahoo/Data/RB/Mouse/kim-2016-rods-mm-idx.txt
survival= /booleanfs2/sahoo/Data/RB/Mouse/kim-2016-rods-mm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/RB/Mouse/kim-2016-rods-mm-ih.txt
info= /booleanfs2/sahoo/Data/RB/Mouse/kim-2016-rods-mm-info.txt
key= rt:
source= GSE74657

[RT59]
name = Lu 2020 retina scRNA-seq Hs
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE138002/lu-2020/lu-2020-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE138002/lu-2020/lu-2020-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE138002/lu-2020/lu-2020-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE138002/lu-2020/lu-2020-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE138002/lu-2020/lu-2020-info.txt
key = rt:
source = GSE122970 GSE116106 GSE138002

[B7]
name = Daemen 2020 NASH Macrophage scRNA-seq
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE162651/GSE162651-GPL24247-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE162651/GSE162651-GPL24247-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE162651/GSE162651-GPL24247-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE162651/GSE162651-GPL24247-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE162651/GSE162651-GPL24247-info.txt
key = liver:
source = GSE162651

[RT60]
name = Peng 2020 retina scRNA-seq Hs
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE148077/GSE148077-GPL16791-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE148077/GSE148077-GPL16791-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE148077/GSE148077-GPL16791-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE148077/GSE148077-GPL16791-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE148077/GSE148077-GPL16791-info.txt
key = rt:
source = GSE148077

[PLP7]
name= Peters 2017 IBD
expr= /booleanfs2/sahoo/Data/Colon/Polyps/peters-2017-ibd-expr.txt
index= /booleanfs2/sahoo/Data/Colon/Polyps/peters-2017-ibd-idx.txt
survival= /booleanfs2/sahoo/Data/Colon/Polyps/peters-2017-ibd-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Colon/Polyps/peters-2017-ibd-ih.txt
info= /booleanfs2/sahoo/Data/Colon/Polyps/peters-2017-ibd-info.txt
key= polyps:
source= GSE83687

[PLP7.2]
name= Peters 2017 CD RNASeq
expr= /booleanfs2/sahoo/Data/Pradipta/CD/peters-rnaseq-cd-expr.txt
index= /booleanfs2/sahoo/Data/Pradipta/CD/peters-rnaseq-cd-idx.txt
survival= /booleanfs2/sahoo/Data/Pradipta/CD/peters-rnaseq-cd-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Pradipta/CD/peters-rnaseq-cd-ih.txt
info= /booleanfs2/sahoo/Data/Pradipta/CD/peters-rnaseq-cd-info.txt
key= polyps:
source= GSE83687

[PLP7.3]
name= Peters 2017 UC RNASeq
expr= /booleanfs2/sahoo/Data/Pradipta/UC/peters-rnaseq-uc-expr.txt
index= /booleanfs2/sahoo/Data/Pradipta/UC/peters-rnaseq-uc-idx.txt
survival= /booleanfs2/sahoo/Data/Pradipta/UC/peters-rnaseq-uc-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Pradipta/UC/peters-rnaseq-uc-ih.txt
info= /booleanfs2/sahoo/Data/Pradipta/UC/peters-rnaseq-uc-info.txt
key= polyps:
source= GSE83687

[PLP10]
name= Arijs 2018 UC
expr= /booleanfs2/sahoo/Data/Colon/Polyps/arijs-2018-uc-expr.txt
index= /booleanfs2/sahoo/Data/Colon/Polyps/arijs-2018-uc-idx.txt
survival= /booleanfs2/sahoo/Data/Colon/Polyps/arijs-2018-uc-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Colon/Polyps/arijs-2018-uc-ih.txt
info= /booleanfs2/sahoo/Data/Colon/Polyps/arijs-2018-uc-info.txt
key= polyps:
source= GSE73661

[G19]
name=  Novershtern 2011 Human Hematopoiesis
expr= /booleanfs/sahoo/Networks/Survival/novershtern-2011-hh-expr.txt
index= /booleanfs/sahoo/Networks/Survival/novershtern-2011-hh-idx.txt
survival= /booleanfs/sahoo/Networks/Survival/novershtern-2011-hh-survival.txt
indexHeader= /booleanfs/sahoo/Networks/Survival/novershtern-2011-hh-ih.txt
info= /booleanfs/sahoo/Networks/Survival/novershtern-2011-hh-info.txt
key= gbm:blood:eos:
source= GSE24759

[G24]
name=  Ratliff 2020 Hematopoietic Stem Cells Hs
expr= /Users/rohan/public_html/Hegemon/Data2/Data/GSE138544/GSE138544-GPL24676-expr.txt
index= /Users/rohan/public_html/Hegemon/Data2/Data/GSE138544/GSE138544-GPL24676-idx.txt
survival= /Users/rohan/public_html/Hegemon/Data2/Data/GSE138544/GSE138544-GPL24676-survival.txt
indexHeader= /Users/rohan/public_html/Hegemon/Data2/Data/GSE138544/GSE138544-GPL24676-ih.txt
info= /Users/rohan/public_html/Hegemon/Data2/Data/GSE138544/GSE138544-GPL24676-info.txt
key= gbm:blood:
source= GSE138544

[MACV52]
name = Jeffrey 2006 Mac Eos Hs
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/jeffrey-2006-imm-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/jeffrey-2006-imm-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/jeffrey-2006-imm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/jeffrey-2006-imm-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/jeffrey-2006-imm-info.txt
key= macv:eos:
source= GSE3982

[MACV53]
name = Sippel 2018 Eosinophil Hs
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/sippel-2018-eos-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/sippel-2018-eos-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/sippel-2018-eos-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/sippel-2018-eos-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/sippel-2018-eos-info.txt
key= macv:eos:
source= GSE75142

[MACV54]
name = Puan 2017 Basophil
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/puan-2017-bas-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/puan-2017-bas-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/puan-2017-bas-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/puan-2017-bas-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/puan-2017-bas-info.txt
key= macv:
source= GSE70013

[MACV55]
name = Klocperk 2020 Neutrophil TPM
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-tpm-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-tpm-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-tpm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-tpm-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-tpm-info.txt
key= macv:neu:
source= GSE143143

[MACV56]
name = Klocperk 2020 Neutrophil CPM
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-cpm-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-cpm-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-cpm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-cpm-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE143143/klocperk-2020-neu-cpm-info.txt
key= macv:neu:
source= GSE143143

[MACV57]
name = Sayama 2002 mast
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE3271/sayama-2002-mast-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE3271/sayama-2002-mast-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE3271/sayama-2002-mast-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE3271/sayama-2002-mast-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE3271/sayama-2002-mast-info.txt
key= macv:
source= GSE3271

[MACV58]
name = Lenardo 2020 tcell
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE135936/lenardo-2020-tcell-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE135936/lenardo-2020-tcell-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE135936/lenardo-2020-tcell-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE135936/lenardo-2020-tcell-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE135936/lenardo-2020-tcell-info.txt
key= macv:
source= GSE135936

[MACV59]
name = Nair 2015 NKT
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE77909/nair-2015-nkt-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE77909/nair-2015-nkt-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE77909/nair-2015-nkt-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE77909/nair-2015-nkt-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE77909/nair-2015-nkt-info.txt
key= macv:
source= GSE77909

[MACV60]
name = Johnson 2020 mo-DC HIV
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-info.txt
key= macv:
source= GSE125817

[MACV60.2]
name = Johnson 2020 mo-DC HIV mapped to Mm
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-2-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-2-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-2-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-2-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/GSE125817/johnson-2020-dc-2-info.txt
key= macv:
source= GSE125817

[MACV61]
name = Abbas 2005 Immune Activated
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/abbas-2005-imm-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/abbas-2005-imm-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/abbas-2005-imm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/abbas-2005-imm-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/abbas-2005-imm-info.txt
key= macv:
source= GSE22886

[MACV62]
name = Metcalf 2015 Immune Cells
expr= /booleanfs2/sahoo/Data/Macrophage/Validation/metcalf-2015-imm-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/Validation/metcalf-2015-imm-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Validation/metcalf-2015-imm-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/Validation/metcalf-2015-imm-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/Validation/metcalf-2015-imm-info.txt
key= macv:
source= GSE62627

[EO1]
name = Nelson 2019 Eosinophils Hs
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE128027/GSE128027-GPL16791-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE128027/GSE128027-GPL16791-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE128027/GSE128027-GPL16791-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE128027/GSE128027-GPL16791-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE128027/GSE128027-GPL16791-info.txt
key = eos:macv:
source = GSE128027

[EO2]
name = Dolitzky 2021 Eosinophils Mm
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE189213/GSE189213-GPL21626-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE189213/GSE189213-GPL21626-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE189213/GSE189213-GPL21626-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE189213/GSE189213-GPL21626-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE189213/GSE189213-GPL21626-info.txt
key = eos:macv:
source = GSE189213

[EO3]
name = Barnig 2015 Eosinophils Mm Hs
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE65239/GSE65239-GPL13607-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE65239/GSE65239-GPL13607-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE65239/GSE65239-GPL13607-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE65239/GSE65239-GPL13607-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE65239/GSE65239-GPL13607-info.txt
key = eos:macv:
source = GSE65239

[EO4]
name = Schruefer 2021 Eosinophils Mm
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE165694/GSE165694-GPL17021-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE165694/GSE165694-GPL17021-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE165694/GSE165694-GPL17021-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE165694/GSE165694-GPL17021-ih.txt
info  = /Users/rohan/public_html/Hegemon/Data2/Data/GSE165694/GSE165694-GPL17021-info.txt
key = eos:macv:
source = GSE165694

[EO5]
name = Bozec 2020 Eosinophils scRNAseq Mm
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE153632/GSE153632-GPL17021-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE153632/GSE153632-GPL17021-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE153632/GSE153632-GPL17021-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE153632/GSE153632-GPL17021-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE153632/GSE153632-GPL17021-info.txt
key = eos:macv:
source = GSE153632

[MAC117]
name= Juss 2016 neutrophils ARDS
expr= /booleanfs2/sahoo/Data/Macrophage/juss-2016-ards-expr.txt
index= /booleanfs2/sahoo/Data/Macrophage/juss-2016-ards-idx.txt
survival= /booleanfs2/sahoo/Data/Macrophage/juss-2016-ards-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Macrophage/juss-2016-ards-ih.txt
info= /booleanfs2/sahoo/Data/Macrophage/juss-2016-ards-info.txt
key= macv:neu:
source= GSE76293

[SHL1]
name= Neutrophil 2016
expr= /booleanfs2/sahoo/Data/Blood/Shelley/shelley-2016-neutrophil-expr.txt
index= /booleanfs2/sahoo/Data/Blood/Shelley/shelley-2016-neutrophil-idx.txt
survival= /booleanfs2/sahoo/Data/Blood/Shelley/shelley-2016-neutrophil-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Blood/Shelley/shelley-2016-neutrophil-ih.txt
info= /booleanfs2/sahoo/Data/Blood/Shelley/shelley-2016-neutrophil-info.txt
key= shl:macv:neu:
source= Shelley Lawrence

[EO6]
name = Uchida 2021 Eosinophils scRNAseq Hs
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE167540/GSE167540-GPL16791-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE167540/GSE167540-GPL16791-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE167540/GSE167540-GPL16791-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE167540/GSE167540-GPL16791-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE167540/GSE167540-GPL16791-info.txt
key = macv:eos:
source = GSE167540

[EO7]
name = Diny 2021 Eosinophils Mm
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE185070/GSE185070-GPL21103-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE185070/GSE185070-GPL21103-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE185070/GSE185070-GPL21103-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE185070/GSE185070-GPL21103-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE185070/GSE185070-GPL21103-info.txt
key = macv:eos:
source = GSE185070

[EO8]
name = Sek 2020 Eosinophils Mm
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE158666/GSE158666-GPL21103-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE158666/GSE158666-GPL21103-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE158666/GSE158666-GPL21103-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE158666/GSE158666-GPL21103-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE158666/GSE158666-GPL21103-info.txt
key = macv:eos:
source = GSE158666

[NEU1]
name = Ballesteros 2019 Neutrophils Mm
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE141745/GSE141745-GPL17021-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE141745/GSE141745-GPL17021-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE141745/GSE141745-GPL17021-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE141745/GSE141745-GPL17021-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE141745/GSE141745-GPL17021-info.txt
key = macv:neu:
source = GSE141745

[NEU2]
name = Ballesteros 2019 Tissue Neutrophils Mm
expr  = /Users/rohan/public_html/Hegemon/Data2/Data/GSE142432/GSE142432-GPL17021-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE142432/GSE142432-GPL17021-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE142432/GSE142432-GPL17021-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE142432/GSE142432-GPL17021-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE142432/GSE142432-GPL17021-info.txt
key = macv:neu:
source = GSE142432

[GL1]
name=  Human U133 Plus 2.0
expr= /booleanfs2/sahoo/Data/Public/GPL570/human-gpl570-expr.txt
index= /booleanfs2/sahoo/Data/Public/GPL570/human-gpl570-idx.txt
survival1= /booleanfs2/sahoo/Data/Public/GPL570/human-gpl570-survival.txt
survival= /booleanfs2/sahoo/Data/Macrophage/Analysis/figures/human-gpl570-survival.txt
indexHeader= /booleanfs2/sahoo/Data/Public/GPL570/human-gpl570-ih.txt
info= /booleanfs2/sahoo/Data/Public/GPL570/human-gpl570-info.txt
key= global:cse291:cellcycle:eos:
source= GSE119087

[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /Users/rohan/public_html/Hegemon/Data2/Data/GSE178883/GSE178883-GPL24676-expr.txt
index = /Users/rohan/public_html/Hegemon/Data2/Data/GSE178883/GSE178883-GPL24676-idx.txt
survival = /Users/rohan/public_html/Hegemon/Data2/Data/GSE178883/GSE178883-GPL24676-survival.txt
indexHeader = /Users/rohan/public_html/Hegemon/Data2/Data/GSE178883/GSE178883-GPL24676-ih.txt
info = /Users/rohan/public_html/Hegemon/Data2/Data/GSE178883/GSE178883-GPL24676-info.txt
key = macv:neu:
source = GSE178883
[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = NEU3
source = GSE178883
[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = NEU3
source = GSE178883


[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = NEU3
source = GSE178883

[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = NEU3
source = GSE178883

[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = NEU3
source = GSE178883

[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = neu:
source = GSE178883

[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = neu:
source = GSE178883

[NEU3]
name = Shirakawa 2021 Neutrophil NETosis
expr = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-expr.txt
index = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-idx.txt
survival = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-survival.txt
indexHeader = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-ih.txt
info = /mnt/booleanfs2/sahoo/Data/BooleanLab/Rohan/Data/Data/GSE178883GSE178883-GPL24676-info.txt
key = neu:
source = GSE178883
