Signatures of Macrophage Reactivity and Tolerance (SMaRT)

Model Selection:
Dataset Selection:

Instructions:

Select a model based on the clusters from the macrophage network or custom up/down-regulated genes from other analysis.
Select a dataset
Click on "Submit" or "Download" and wait for the results. (it is a bit slow)

Pradipta Ghosh*, Saptarshi Sinha, Dharanidhar Dang, Gajanan D. Katkar, Sahar Taheri, Soumita Das and Debashis Sahoo. Machine Learning Identifies Signatures of Macrophage Reactivity and Tolerance that Predict Disease Outcomes.

If you have an questions or requests relating to the paper, associated data or app please contact Debashis Sahoo: dsahoo@ucsd.edu

All Data are available publicly. Codes can be accessed using following commands:

      git clone https://github.com/sahoo00/BoNE
      cd BoNE/SMaRT
      jupyter-notebook --no-browser

Last Update: Thu 28 Apr 2022 10:16:02 PM PDT

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